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hsdl2 hydroxysteroid dehydrogenase like 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111238815, updated on 15-Mar-2024

Summary

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Gene symbol
hsdl2
Gene description
hydroxysteroid dehydrogenase like 2
See related
Ensembl:ENSSDUG00000002605
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019175928.1 (20848..28457, complement)

NW_019175928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111238816 Neighboring gene polypyrimidine tract binding protein 3 Neighboring gene UDP-glucose ceramide glucosyltransferase Neighboring gene molybdenum cofactor synthesis 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019175928 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxysteroid dehydrogenase-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019175928.1 Reference Sdu_1.0 Primary Assembly

    Range
    20848..28457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022768503.1 → XP_022624224.1  hydroxysteroid dehydrogenase-like protein 2

    UniProtKB/TrEMBL
    A0A3B4TBV0
    Related
    ENSSDUP00000003432.1, ENSSDUT00000003509.1
    Conserved Domains (2) summary
    PRK08278
    Location:8 → 274
    PRK08278; short chain dehydrogenase; Provisional
    pfam02036
    Location:324 → 413
    SCP2; SCP-2 sterol transfer family
Nucleotide Protein
Heading Accession and Version

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