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serinc1 serine incorporator 1 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111238625, updated on 15-Mar-2024

Summary

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Gene symbol
serinc1
Gene description
serine incorporator 1
See related
Ensembl:ENSSDUG00000001091
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174280.1 (663742..688656)

NW_019174280.1Genomic Context describing neighboring genes Neighboring gene NUS1 dehydrodolichyl diphosphate synthase subunit Neighboring gene solute carrier family 35 member F1 Neighboring gene heat shock transcription factor 2 Neighboring gene uncharacterized LOC111236112

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174280 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine incorporator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174280.1 Reference Sdu_1.0 Primary Assembly

    Range
    663742..688656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022768218.1 → XP_022623939.1  serine incorporator 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4T5G7
    Related
    ENSSDUP00000001388.1, ENSSDUT00000001443.1
    Conserved Domains (1) summary
    pfam03348
    Location:16 → 457
    Serinc; Serine incorporator (Serinc)

  2. XM_022768227.1 → XP_022623948.1  serine incorporator 1 isoform X2

    Conserved Domains (1) summary
    pfam03348
    Location:16 → 411
    Serinc; Serine incorporator (Serinc)
Nucleotide Protein
Heading Accession and Version

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