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nup155 nucleoporin 155 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111237778, updated on 15-Mar-2024

Summary

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Gene symbol
nup155
Gene description
nucleoporin 155
See related
Ensembl:ENSSDUG00000005030
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019175347.1 (488387..502252)

NW_019175347.1Genomic Context describing neighboring genes Neighboring gene melan-A Neighboring gene nipped-B-like protein Neighboring gene rhodopsin-like Neighboring gene zinc finger DHHC-type palmitoyltransferase 8a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019175347 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore inner ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup155

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019175347.1 Reference Sdu_1.0 Primary Assembly

    Range
    488387..502252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022767004.1 → XP_022622725.1  nuclear pore complex protein Nup155

    UniProtKB/TrEMBL
    A0A3B4TLR3, A0A3B4TME2
    Related
    ENSSDUP00000006932.1, ENSSDUT00000007064.1
    Conserved Domains (2) summary
    pfam03177
    Location:1006 → 1165
    Nucleoporin_C; Non-repetitive/WGA-negative nucleoporin C-terminal
    pfam08801
    Location:72 → 507
    Nucleoporin_N; Nup133 N terminal like
Nucleotide Protein
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