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hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111235061, updated on 15-Mar-2024

Summary

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Gene symbol
hsd17b10
Gene description
hydroxysteroid (17-beta) dehydrogenase 10
See related
Ensembl:ENSSDUG00000006212
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See hsd17b10 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174723.1 (4375347..4378931)

NW_019174723.1Genomic Context describing neighboring genes Neighboring gene isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like Neighboring gene family with sequence similarity 120 member C Neighboring gene uncharacterized LOC111234942 Neighboring gene uncharacterized LOC111234940 Neighboring gene uncharacterized LOC111234943

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174723 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estradiol 17-beta-dehydrogenase [NAD(P)] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in androgen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in estrogen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxyacyl-CoA dehydrogenase type-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174723.1 Reference Sdu_1.0 Primary Assembly

    Range
    4375347..4378931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022763364.1 → XP_022619085.1  3-hydroxyacyl-CoA dehydrogenase type-2

    UniProtKB/TrEMBL
    A0A3B4TR38, A0A3B4TR48
    Related
    ENSSDUP00000008488.1, ENSSDUT00000008641.1
    Conserved Domains (1) summary
    cd05371
    Location:8 → 260
    HSD10-like_SDR_c; 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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