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erich3 glutamate-rich 3 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111232086, updated on 15-Mar-2024

Summary

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Gene symbol
erich3
Gene description
glutamate-rich 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174577.1 (1921934..1935891, complement)

NW_019174577.1Genomic Context describing neighboring genes Neighboring gene fucose-1-phosphate guanylyltransferase Neighboring gene TNNI3 interacting kinase Neighboring gene solute carrier family 44 member 5b Neighboring gene LIM homeobox 8 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174577 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
glutamate-rich protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174577.1 Reference Sdu_1.0 Primary Assembly

    Range
    1921934..1935891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022759440.1 → XP_022615161.1  glutamate-rich protein 3

    Conserved Domains (3) summary
    pfam15257
    Location:298 → 401
    DUF4590; Domain of unknown function (DUF4590)
    cl26511
    Location:749 → 1368
    Neuromodulin_N; Gap junction protein N-terminal region
    cl26761
    Location:1209 → 1716
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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