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ttll7 tubulin tyrosine ligase-like family, member 7 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111231765, updated on 15-Mar-2024

Summary

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Gene symbol
ttll7
Gene description
tubulin tyrosine ligase-like family, member 7
See related
Ensembl:ENSSDUG00000004052
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174257.1 (2480794..2542319)

NW_019174257.1Genomic Context describing neighboring genes Neighboring gene protein kinase, cAMP-dependent, catalytic, beta a Neighboring gene sterile alpha motif domain containing 13 Neighboring gene adhesion G protein-coupled receptor L2a Neighboring gene adhesion G protein-coupled receptor L4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174257 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin polyglutamylase TTLL7
Names
tubulin tyrosine ligase like 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174257.1 Reference Sdu_1.0 Primary Assembly

    Range
    2480794..2542319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022759036.1 → XP_022614757.1  tubulin polyglutamylase TTLL7

    UniProtKB/TrEMBL
    A0A3B4TH49
    Related
    ENSSDUP00000005519.1, ENSSDUT00000005625.1
    Conserved Domains (1) summary
    pfam03133
    Location:90 → 376
    TTL; Tubulin-tyrosine ligase family
Nucleotide Protein
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