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ano10a anoctamin 10a [ Seriola dumerili (greater amberjack) ]

Gene ID: 111226052, updated on 15-Mar-2024

Summary

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Gene symbol
ano10a
Gene description
anoctamin 10a
See related
Ensembl:ENSSDUG00000010100
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
ano10
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174271.1 (469592..516987, complement)

NW_019174271.1Genomic Context describing neighboring genes Neighboring gene protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) Neighboring gene SNF related kinase a Neighboring gene abhydrolase domain containing 5a Neighboring gene uncharacterized LOC111226010

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174271 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-10
Names
anoctamin 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174271.1 Reference Sdu_1.0 Primary Assembly

    Range
    469592..516987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022751147.1 → XP_022606868.1  anoctamin-10 isoform X2

    UniProtKB/TrEMBL
    A0A3B4U6S2, A0A3B4U7Z0
    Related
    ENSSDUP00000013898.1, ENSSDUT00000014159.1
    Conserved Domains (1) summary
    pfam04547
    Location:204 → 632
    Anoctamin; Calcium-activated chloride channel

  2. XM_022751139.1 → XP_022606860.1  anoctamin-10 isoform X1

    UniProtKB/TrEMBL
    A0A3B4U7Z0
    Conserved Domains (1) summary
    pfam04547
    Location:204 → 632
    Anoctamin; Calcium-activated chloride channel
Nucleotide Protein
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