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phf14 PHD finger protein 14 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111222790, updated on 15-Mar-2024

Summary

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Gene symbol
phf14
Gene description
PHD finger protein 14
See related
Ensembl:ENSSDUG00000012968
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174363.1 (955603..1049649)

NW_019174363.1Genomic Context describing neighboring genes Neighboring gene neurexophilin 1 Neighboring gene uncharacterized LOC111222797 Neighboring gene glucocorticoid induced 1a Neighboring gene UBAP1-MVB12-associated (UMA) domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174363 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PHD finger protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174363.1 Reference Sdu_1.0 Primary Assembly

    Range
    955603..1049649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022746642.1 → XP_022602363.1  PHD finger protein 14 isoform X1

    UniProtKB/TrEMBL
    A0A3B4UGH3
    Related
    ENSSDUP00000017776.1, ENSSDUT00000018100.1
    Conserved Domains (3) summary
    cd15562
    Location:704 → 753
    PHD2_PHF14; PHD finger 2 found in PHD finger protein 14 (PHF14) and similar proteins
    cd15674
    Location:361 → 474
    ePHD_PHF14; Extended PHD finger found in PHD finger protein 14 (PHF14) and similar proteins
    cl26518
    Location:297 → 648
    EPL1; Enhancer of polycomb-like

  2. XM_022746643.1 → XP_022602364.1  PHD finger protein 14 isoform X2

    UniProtKB/TrEMBL
    A0A3B4UGH3
    Related
    ENSSDUP00000017824.1, ENSSDUT00000018149.1
    Conserved Domains (3) summary
    cd15562
    Location:704 → 753
    PHD2_PHF14; PHD finger 2 found in PHD finger protein 14 (PHF14) and similar proteins
    cd15674
    Location:361 → 474
    ePHD_PHF14; Extended PHD finger found in PHD finger protein 14 (PHF14) and similar proteins
    cl26518
    Location:297 → 648
    EPL1; Enhancer of polycomb-like
Nucleotide Protein
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