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tm7sf2 transmembrane 7 superfamily member 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111222365, updated on 15-Mar-2024

Summary

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Gene symbol
tm7sf2
Gene description
transmembrane 7 superfamily member 2
See related
Ensembl:ENSSDUG00000016149
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174346.1 (2305718..2317207, complement)

NW_019174346.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 8 member 4a Neighboring gene cornichon family AMPA receptor auxiliary protein 2 Neighboring gene VPS51 subunit of GARP complex Neighboring gene FERM domain containing 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174346 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta(14)-sterol reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174346.1 Reference Sdu_1.0 Primary Assembly

    Range
    2305718..2317207 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022746074.1 → XP_022601795.1  delta(14)-sterol reductase isoform X1

    UniProtKB/TrEMBL
    A0A3B4UUZ9
    Conserved Domains (1) summary
    cl21511
    Location:68 → 477
    PEMT; Phospholipid methyltransferase

  2. XM_022746075.1 → XP_022601796.1  delta(14)-sterol reductase isoform X2

    UniProtKB/TrEMBL
    A0A3B4UUZ9
    Related
    ENSSDUP00000022204.1, ENSSDUT00000022611.1
    Conserved Domains (1) summary
    cl21511
    Location:16 → 425
    PEMT; Phospholipid methyltransferase
Nucleotide Protein
Heading Accession and Version

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