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capza2 capping actin protein of muscle Z-line subunit alpha 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111220532, updated on 21-Dec-2023

Summary

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Gene symbol
capza2
Gene description
capping actin protein of muscle Z-line subunit alpha 2
See related
Ensembl:ENSSDUG00000016536
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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See capza2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174325.1 (756192..775789, complement)

NW_019174325.1Genomic Context describing neighboring genes Neighboring gene wingless-type MMTV integration site family member 2 Neighboring gene suppression of tumorigenicity 7 Neighboring gene MET proto-oncogene, receptor tyrosine kinase Neighboring gene caveolin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174325 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of F-actin capping protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cortical patch IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-capping protein subunit alpha-2
Names
capping actin protein of muscle Z-line alpha subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174325.1 Reference Sdu_1.0 Primary Assembly

    Range
    756192..775789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022743616.1 → XP_022599337.1  F-actin-capping protein subunit alpha-2

    UniProtKB/TrEMBL
    A0A3B4UWB9, A0A3B4UY17
    Related
    ENSSDUP00000022748.1, ENSSDUT00000023164.1
    Conserved Domains (1) summary
    pfam01267
    Location:32 → 298
    F-actin_cap_A; F-actin capping protein alpha subunit
Nucleotide Protein
Heading Accession and Version

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