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PIPOX pipecolic acid and sarcosine oxidase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111185986, updated on 15-Mar-2024

Summary

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Gene symbol
PIPOX
Gene description
pipecolic acid and sarcosine oxidase
See related
Ensembl:ENSDLEG00000006845
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098035.1 (4223141..4235540)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160909.1 (4150996..4163406)

NW_022098035.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 12 Neighboring gene seizure related 6 homolog Neighboring gene lisH domain-containing protein C1711.05-like Neighboring gene myosin XVIIIA Neighboring gene histone H1-I-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-pipecolate oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sarcosine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-lysine catabolic process to acetyl-CoA via L-pipecolate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal sarcosine oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098035.1 Reference ASM228892v3 Primary Assembly

    Range
    4223141..4235540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022596150.2 → XP_022451858.1  peroxisomal sarcosine oxidase

    UniProtKB/TrEMBL
    A0A2Y9Q8N6
    Related
    ENSDLEP00000009377.1, ENSDLET00000010345.1
    Conserved Domains (1) summary
    TIGR01377
    Location:8 → 388
    soxA_mon; sarcosine oxidase, monomeric form
Nucleotide Protein
Heading Accession and Version

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