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TMC6 transmembrane channel like 6 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111182767, updated on 15-Mar-2024

Summary

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Gene symbol
TMC6
Gene description
transmembrane channel like 6
See related
Ensembl:ENSDLEG00000010712
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098018.1 (16194057..16210436)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160895.1 (7898309..7914724)

NW_022098018.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C17orf99 homolog Neighboring gene transmembrane channel like 8 Neighboring gene uncharacterized LOC111182770 Neighboring gene trinucleotide repeat containing adaptor 6C Neighboring gene uncharacterized LOC111182771

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mechanosensitive monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane channel-like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098018.1 Reference ASM228892v3 Primary Assembly

    Range
    16194057..16210436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022589479.2 → XP_022445187.1  transmembrane channel-like protein 6 isoform X5

    UniProtKB/TrEMBL
    A0A2Y9PPE2
    Conserved Domains (1) summary
    pfam07810
    Location:553 → 642
    TMC; TMC domain

  2. XM_022589475.2 → XP_022445183.1  transmembrane channel-like protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9PQQ5
    Conserved Domains (1) summary
    pfam07810
    Location:553 → 659
    TMC; TMC domain

  3. XM_022589476.2 → XP_022445184.1  transmembrane channel-like protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9PE35
    Conserved Domains (1) summary
    pfam07810
    Location:552 → 658
    TMC; TMC domain

  4. XM_022589477.2 → XP_022445185.1  transmembrane channel-like protein 6 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PH84
    Conserved Domains (1) summary
    pfam07810
    Location:549 → 655
    TMC; TMC domain

  5. XM_022589478.2 → XP_022445186.1  transmembrane channel-like protein 6 isoform X4

    UniProtKB/TrEMBL
    A0A2Y9PIT0
    Related
    ENSDLEP00000014558.1, ENSDLET00000016075.1
    Conserved Domains (1) summary
    pfam07810
    Location:548 → 654
    TMC; TMC domain
Nucleotide Protein
Heading Accession and Version

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