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LRRC49 leucine rich repeat containing 49 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111177781, updated on 15-Mar-2024

Summary

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Gene symbol
LRRC49
Gene description
leucine rich repeat containing 49
See related
Ensembl:ENSDLEG00000001596
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See LRRC49 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098012.1 (18222856..18351273)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160876.1 (18224555..18353073)

NW_022098012.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene uveal autoantigen with coiled-coil domains and ankyrin repeats Neighboring gene La ribonucleoprotein 6, translational regulator Neighboring gene THAP domain containing 10 Neighboring gene thrombospondin type 1 domain containing 4 Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene 40S ribosomal protein S13-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 49

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098012.1 Reference ASM228892v3 Primary Assembly

    Range
    18222856..18351273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022579921.2 → XP_022435629.1  leucine-rich repeat-containing protein 49 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9NKL2
    Related
    ENSDLEP00000001962.1, ENSDLET00000002230.1
    Conserved Domains (2) summary
    COG4886
    Location:95 → 259
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:114 → 135
    LRR_RI; leucine-rich repeat [structural motif]

  2. XM_022579922.2 → XP_022435630.1  leucine-rich repeat-containing protein 49 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9NNN1
    Related
    ENSDLEP00000001984.1, ENSDLET00000002253.1
    Conserved Domains (2) summary
    COG4886
    Location:76 → 240
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:95 → 116
    LRR_RI; leucine-rich repeat [structural motif]

  3. XM_030761708.1 → XP_030617568.1  leucine-rich repeat-containing protein 49 isoform X3

    UniProtKB/TrEMBL
    A0A7F8KBM0
    Conserved Domains (2) summary
    sd00033
    Location:40 → 61
    LRR_RI; leucine-rich repeat [structural motif]
    NF033189
    Location:19 → 198
    internalin_A; class 1 internalin InlA
Nucleotide Protein
Heading Accession and Version

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