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SFMBT1 Scm like with four mbt domains 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111174290, updated on 15-Mar-2024

Summary

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Gene symbol
SFMBT1
Gene description
Scm like with four mbt domains 1
See related
Ensembl:ENSDLEG00000018300
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098020.1 (26076484..26208193)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160866.1 (24763026..24894735)

NW_022098020.1Genomic Context describing neighboring genes Neighboring gene protein kinase C delta Neighboring gene RFT1 homolog Neighboring gene store-operated calcium entry regulator STIMATE Neighboring gene musculoskeletal, embryonic nuclear protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scm-like with four MBT domains protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098020.1 Reference ASM228892v3 Primary Assembly

    Range
    26076484..26208193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022572872.1 → XP_022428580.1  scm-like with four MBT domains protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9N1N5
    Related
    ENSDLEP00000025477.1, ENSDLET00000028032.1
    Conserved Domains (3) summary
    cd09581
    Location:782 → 866
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:502 → 617
    SLED; SLED domain

  2. XM_022572871.1 → XP_022428579.1  scm-like with four MBT domains protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9N1N5
    Conserved Domains (3) summary
    cd09581
    Location:782 → 866
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:502 → 617
    SLED; SLED domain

  3. XM_022572870.1 → XP_022428578.1  scm-like with four MBT domains protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9NH21
    Conserved Domains (3) summary
    cd09581
    Location:829 → 913
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:549 → 664
    SLED; SLED domain
Nucleotide Protein
Heading Accession and Version

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