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ISY1 ISY1 splicing factor homolog [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111168795, updated on 15-Mar-2024

Summary

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Gene symbol
ISY1
Gene description
ISY1 splicing factor homolog
See related
Ensembl:ENSDLEG00000010246
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See ISY1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098058.1 (6874439..6892267, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160992.1 (1495440..1513191, complement)

NW_022098058.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111168851 Neighboring gene glycoprotein IX platelet Neighboring gene RAB43, member RAS oncogene family Neighboring gene ferritin heavy chain pseudogene Neighboring gene CCHC-type zinc finger nucleic acid binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in generation of catalytic spliceosome for second transesterification step IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA 3'-splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor ISY1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098058.1 Reference ASM228892v3 Primary Assembly

    Range
    6874439..6892267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022562525.2 → XP_022418233.1  pre-mRNA-splicing factor ISY1 homolog

    UniProtKB/TrEMBL
    A0A2Y9MM58
    Related
    ENSDLEP00000013945.1, ENSDLET00000015396.1
    Conserved Domains (1) summary
    pfam06246
    Location:1 → 264
    Isy1; Isy1-like splicing family
Nucleotide Protein
Heading Accession and Version

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