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GATAD2B GATA zinc finger domain containing 2B [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111167195, updated on 15-Mar-2024

Summary

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Gene symbol
GATAD2B
Gene description
GATA zinc finger domain containing 2B
See related
Ensembl:ENSDLEG00000010639
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098061.1 (584469..664647, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160960.1 (582787..664652, complement)

NW_022098061.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 3 Neighboring gene solute carrier family 27 member 3 Neighboring gene DENN domain containing 4B Neighboring gene CREB regulated transcription coactivator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NuRD complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional repressor p66-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098061.1 Reference ASM228892v3 Primary Assembly

    Range
    584469..664647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022559778.2 → XP_022415486.1  transcriptional repressor p66-beta

    UniProtKB/TrEMBL
    A0A2Y9M345
    Related
    ENSDLEP00000014457.1, ENSDLET00000015964.1
    Conserved Domains (2) summary
    pfam00320
    Location:419 → 453
    GATA; GATA zinc finger
    pfam16563
    Location:159 → 194
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  2. XM_022559779.1 → XP_022415487.1  transcriptional repressor p66-beta

    UniProtKB/TrEMBL
    A0A2Y9M345
    Conserved Domains (2) summary
    pfam00320
    Location:419 → 453
    GATA; GATA zinc finger
    pfam16563
    Location:159 → 194
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
Nucleotide Protein
Heading Accession and Version

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