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EBI3 Epstein-Barr virus induced 3 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111166197, updated on 15-Mar-2024

Summary

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Gene symbol
EBI3
Gene description
Epstein-Barr virus induced 3
See related
Ensembl:ENSDLEG00000020198
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098054.1 (4878394..4886154, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160955.1 (4857221..4864981, complement)

NW_022098054.1Genomic Context describing neighboring genes Neighboring gene Src homology 2 domain containing transforming protein D Neighboring gene YJU2 splicing factor homolog Neighboring gene ankyrin repeat domain 24 Neighboring gene sirtuin 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-27 subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098054.1 Reference ASM228892v3 Primary Assembly

    Range
    4878394..4886154 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022557620.1 → XP_022413328.1  interleukin-27 subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A2Y9M7H3
    Related
    ENSDLEP00000028087.1, ENSDLET00000030866.1
    Conserved Domains (1) summary
    cd00063
    Location:126 → 215
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_022557621.1 → XP_022413329.1  interleukin-27 subunit beta isoform X4

    UniProtKB/TrEMBL
    A0A2Y9LUE8
    Conserved Domains (1) summary
    cd00063
    Location:125 → 214
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  3. XM_022557618.1 → XP_022413326.1  interleukin-27 subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LX42
    Conserved Domains (2) summary
    smart00060
    Location:50 → 140
    FN3; Fibronectin type 3 domain
    cd00063
    Location:154 → 243
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  4. XM_022557619.1 → XP_022413327.1  interleukin-27 subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A2Y9M250
    Conserved Domains (2) summary
    smart00060
    Location:50 → 140
    FN3; Fibronectin type 3 domain
    cd00063
    Location:154 → 243
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
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