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TOX thymocyte selection associated high mobility group box [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111165837, updated on 15-Mar-2024

Summary

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Gene symbol
TOX
Gene description
thymocyte selection associated high mobility group box
See related
Ensembl:ENSDLEG00000014593
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098039.1 (15008442..15306100)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160953.1 (518956..816588)

NW_022098039.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111165848 Neighboring gene U6 spliceosomal RNA Neighboring gene neutral sphingomyelinase activation associated factor Neighboring gene syndecan binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in leukocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thymocyte selection-associated high mobility group box protein TOX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098039.1 Reference ASM228892v3 Primary Assembly

    Range
    15008442..15306100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022556827.2 → XP_022412535.1  thymocyte selection-associated high mobility group box protein TOX isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LT55
    Related
    ENSDLEP00000020033.1, ENSDLET00000022082.1
    Conserved Domains (1) summary
    cd00084
    Location:239 → 288
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...

  2. XM_022556826.2 → XP_022412534.1  thymocyte selection-associated high mobility group box protein TOX isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LS48
    Related
    ENSDLEP00000020023.1, ENSDLET00000022071.1
    Conserved Domains (1) summary
    cd00084
    Location:261 → 310
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...

  3. XM_022556828.2 → XP_022412536.1  thymocyte selection-associated high mobility group box protein TOX isoform X3

    UniProtKB/TrEMBL
    A0A2Y9LUW9
    Conserved Domains (1) summary
    cd00084
    Location:233 → 282
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...

  4. XM_022556829.2 → XP_022412537.1  thymocyte selection-associated high mobility group box protein TOX isoform X4

    UniProtKB/TrEMBL
    A0A2Y9LZS4
    Conserved Domains (1) summary
    cd00084
    Location:222 → 271
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
Nucleotide Protein
Heading Accession and Version

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