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EGLN1 egl-9 family hypoxia inducible factor 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111163986, updated on 15-Mar-2024

Summary

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Gene symbol
EGLN1
Gene description
egl-9 family hypoxia inducible factor 1
See related
Ensembl:ENSDLEG00000007575
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098038.1 (7994772..8053553)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160930.1 (7995803..8054249)

NW_022098038.1Genomic Context describing neighboring genes Neighboring gene DISC1 scaffold protein Neighboring gene small nucleolar RNA SNORA25 Neighboring gene translin associated factor X Neighboring gene SprT-like N-terminal domain Neighboring gene exocyst complex component 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
egl nine homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098038.1 Reference ASM228892v3 Primary Assembly

    Range
    7994772..8053553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030763506.1 → XP_030619366.1  egl nine homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A7F8K981
    Conserved Domains (1) summary
    pfam01753
    Location:21 → 58
    zf-MYND; MYND finger

  2. XM_022553237.2 → XP_022408945.1  egl nine homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LHE3
    Related
    ENSDLEP00000010423.1, ENSDLET00000011522.1
    Conserved Domains (2) summary
    smart00702
    Location:233 → 404
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam01753
    Location:21 → 58
    zf-MYND; MYND finger
Nucleotide Protein
Heading Accession and Version

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