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    CHEK1 checkpoint kinase 1 [ Homo sapiens ]

    Gene ID: 1111, updated on 19-May-2012

    Summary

    Official Symbol
    CHEK1provided by HGNC
    Official Full Name
    checkpoint kinase 1provided by HGNC
    Primary source
    HGNC:1925
    See related
    Ensembl:ENSG00000149554; HPRD:04356; MIM:603078; Vega:OTTHUMG00000165853
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CHK1
    Summary
    The protein encoded by this gene belongs to the Ser/Thr protein kinase family. It is required for checkpoint mediated cell cycle arrest in response to DNA damage or the presence of unreplicated DNA. This protein acts to integrate signals from ATM and ATR, two cell cycle proteins involved in DNA damage responses, that also associate with chromatin in meiotic prophase I. Phosphorylation of CDC25A protein phosphatase by this protein is required for cells to delay cell cycle progression in response to double-strand DNA breaks. Several alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Oct 2011]

    Genomic context

    Location :
    11q24.2
    Sequence :
    Chromosome: 11; NC_000011.9 (125495036..125546150)
    See CHEK1 in Epigenomics, MapViewer

    Chromosome 11 - NC_000011.9Genomic Context describing neighboring genes Neighboring gene etoposide induced 2.4 mRNA Neighboring gene STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) Neighboring gene acrosomal vesicle protein 1 Neighboring gene prostate and testis expressed 1 Neighboring gene prostate and testis expressed 2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    HIV-1 protein interactions

    Protein Gene Interaction Pubs
    Vpr vpr HIV-1 Vpr activates ATR, resulting in phosphorylation of Chk1 and activation of the ATR-mediated DNA damage response PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    NC_000011.8 NP_005216.1 E2F1    BIND  PubMed E2F1 interacts with the Chk1 promoter. 
    NC_000011.8 NP_001941.2 E2F4    BIND  PubMed E2F4 interacts with the Chk1 promoter region. 
    NP_001265.1 NP_001175.1 ATR    BIND  PubMed ATR interacts with CHEK1 (CHK1). 
    NP_001265.1 NP_001780.2 CDC25A    BIND  PubMed Chk1 phosphorylates Cdc25A-a. This interaction was modeled on a demonstrated interaction between human Chk1 and Cdc25A from an unspecified species. 
    NP_001265.1 NP_963861.1 CDC25A    BIND  PubMed Chk1 phosphorylates Cdc25A-b. This interaction was modeled on a demonstrated interaction between human Chk1 and Cdc25A from an unspecified species. 
    NP_001265.1 CDC25C    BIND  PubMed CHEK1 (Chk1) phosphorylates an unspecified isoform of CDC25C. 
    NP_001265.1 RAD51    BIND  PubMed Chk1 interacts with RAD51. 
    NP_001265.1 NP_068810.2 RELA    BIND  PubMed RELA interacts with CHEK1. This interaction was modeled on a demonstrated interaction between human RELA, and CHEK1 from an unspecified species. 
    O14757 Q9NY61 AATF    HPRD  PubMed  
    O14757 P31749 AKT1    HPRD  PubMed  
    O14757 Q13315 ATM    HPRD  PubMed  
    O14757 Q13535 ATR    HPRD  PubMed  
    O14757 P54132 BLM    HPRD  PubMed  
    O14757 P30304 CDC25A    HPRD  PubMed  
    O14757 P30305 CDC25B    HPRD  PubMed  
    O14757 P30307 CDC25C    HPRD  PubMed  
    O14757 Q9HAW4 CLSPN    HPRD  PubMed  
    O14757 P67870 CSNK2B    HPRD  PubMed  
    O14757 Q13616 CUL1    HPRD  PubMed  
    O14757 Q13619 CUL4A    HPRD  PubMed  
    O14757 P07900 HSP90AA1    HPRD  PubMed  
    O14757 O15151 MDM4    HPRD  PubMed  
    O14757 Q06609 RAD51    HPRD  PubMed  
    O14757 Q04206 RELA    HPRD  PubMed  
    O14757 Q13485 SMAD4    HPRD  PubMed  
    O14757 Q9UKI8 TLK1    HPRD  PubMed  
    O14757 P04637 TP53    HPRD  PubMed  
    O14757 Ubiquitin B UBB    HPRD  PubMed  
    O14757 P98170 XIAP    HPRD  PubMed  
    O14757 P12956 XRCC6    HPRD  PubMed  
    O14757 P61981 YWHAG    HPRD  PubMed  
    BioGRID:107536 BioGRID:106962 ATM    BioGRID  PubMed Protein-peptide 
    BioGRID:107536 BioGRID:107027 ATR    BioGRID  PubMed Protein-peptide 
    BioGRID:107536 BioGRID:107110 BLM    BioGRID  PubMed Affinity Capture-Western; Co-localization 
    BioGRID:107536 BioGRID:107428 CDC25A    BioGRID  PubMed Biochemical Activity; Reconstituted Complex 
    BioGRID:107536 BioGRID:107429 CDC25B    BioGRID  PubMed Biochemical Activity; Reconstituted Complex 
    BioGRID:107536 BioGRID:107430 CDC25C    BioGRID  PubMed Biochemical Activity; Reconstituted Complex 
    BioGRID:107536 BioGRID:107460 CDKN1A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:122015 CLSPN    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:107536 BioGRID:107841 CSNK2A1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107536 BioGRID:114029 CUL4A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:198694 Chek1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107536 BioGRID:108009 DDB1    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107536 BioGRID:108123 DNMT1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:108475 FANCE    BioGRID  PubMed Biochemical Activity 
    BioGRID:107536 BioGRID:109552 HSP90AA1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:32051 MCD1    BioGRID  PubMed Biochemical Activity 
    BioGRID:107536 BioGRID:122776 MCPH1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107536 BioGRID:110359 MDM4    BioGRID  PubMed Biochemical Activity 
    BioGRID:107536 BioGRID:110384 MEN1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:110573 MSH2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:109211 MSH6    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:124876 NEK9    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:107536 BioGRID:111142 PCNA    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:111418 POLA1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:111577 PRKDC    BioGRID  PubMed Protein-peptide; Reconstituted Complex 
    BioGRID:107536 BioGRID:109072 SFN    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:114428 TIMELESS    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:113010 TP53    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Co-localization 
    BioGRID:107536 BioGRID:113011 TP53BP1    BioGRID  PubMed Co-localization 
    BioGRID:107536 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:107536 BioGRID:113622 USP7    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:106828 XIAP    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107536 BioGRID:113348 XPO1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107536 BioGRID:113353 XRCC5    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107536 BioGRID:108822 XRCC6    BioGRID  PubMed Affinity Capture-Western 

    General gene information

    Markers

    Homology

    • Homologs of the CHEK1 gene: The CHEK1 gene is conserved in chimpanzee, , dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, , S.pombe, , and N.crassa.
    • Map Viewer (Mouse, Rat)

    Pathways from BioSystems

    • Activation of ATR in response to replication stress, organism-specific biosystem (from REACTOME)
      Activation of ATR in response to replication stress, organism-specific biosystemGenotoxic stress caused by DNA damage or stalled replication forks can lead to genomic instability. To guard against such instability, genotoxically-stressed cells activate checkpoint factors that ha...
    • Cell Cycle, organism-specific biosystem (from REACTOME)
      Cell Cycle, organism-specific biosystem
      Cell Cycle
    • Cell Cycle Checkpoints, organism-specific biosystem (from REACTOME)
      Cell Cycle Checkpoints, organism-specific biosystemA hallmark of the human cell cycle in normal somatic cells is its precision. This remarkable fidelity is achieved by a number of signal transduction pathways, known as checkpoints, which monitor cell...
    • Cell cycle, organism-specific biosystem (from WikiPathways)
      Cell cycle, organism-specific biosystem(From http://en.wikipedia.org/wiki/Cell_cycle) The cell cycle is the series of events that takes place in a cell leading to its division and duplication (replication). Regulation of the cell cycle in...
    • Cell cycle, organism-specific biosystem (from KEGG)
      Cell cycle, organism-specific biosystemMitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps known as G1 and G2 phases. Cycli...
    • Cell cycle, conserved biosystem (from KEGG)
      Cell cycle, conserved biosystemMitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps known as G1 and G2 phases. Cycli...
    • Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex, organism-specific biosystem (from REACTOME)
      Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex, organism-specific biosystemDNA damage induced activation of the checkpoint kinases Chk1/Chk2(Cds1) results in the conversion and/or maintenance of CyclinB:Cdc2 complex in its Tyrosine 15 phosphorylated (inactive) state. Cdc2...
    • Circadian rhythm pathway, organism-specific biosystem (from Pathway Interaction Database)
      Circadian rhythm pathway, organism-specific biosystem
      Circadian rhythm pathway
    • G1/S DNA Damage Checkpoints, organism-specific biosystem (from REACTOME)
      G1/S DNA Damage Checkpoints, organism-specific biosystemIn the G1 phase there are two types of DNA damage responses, the p53-dependent and the p53-independent pathways. The p53-dependent responses inhibit CDKs through the up-regulation of genes encoding ...
    • G2/M Checkpoints, organism-specific biosystem (from REACTOME)
      G2/M Checkpoints, organism-specific biosystemG2/M checkpoints include the checks for damaged DNA, unreplicated DNA, and checks that ensure that the genome is replicated once and only once per cell cycle. If cells pass these checkpoints, they f...
    • G2/M DNA damage checkpoint, organism-specific biosystem (from REACTOME)
      G2/M DNA damage checkpoint, organism-specific biosystemThroughout the cell cycle, the genome is constantly monitored for damage, resulting either from errors of replication, by-products of metabolism or through extrinsic sources such as ultra-violet or i...
    • HTLV-I infection, organism-specific biosystem (from KEGG)
      HTLV-I infection, organism-specific biosystemHuman T-lymphotropic virus type 1 (HTLV-1) is a pathogenic retrovirus that is associated with adult T-cell leukemia/lymphoma (ATL). It is also strongly implicated in non-neoplastic chronic inflammato...
    • HTLV-I infection, conserved biosystem (from KEGG)
      HTLV-I infection, conserved biosystemHuman T-lymphotropic virus type 1 (HTLV-1) is a pathogenic retrovirus that is associated with adult T-cell leukemia/lymphoma (ATL). It is also strongly implicated in non-neoplastic chronic inflammato...
    • IL-3 Signaling Pathway, organism-specific biosystem (from WikiPathways)
      IL-3 Signaling Pathway, organism-specific biosystemInterleukin-3 belongs to a family of cytokines, which includes IL-5 and GM-CSF. It signals through a receptor complex comprising of an IL-3 specific IL-3 receptor alpha subunit (IL3RA) and a common b...
    • Signal Transduction, organism-specific biosystem (from REACTOME)
      Signal Transduction, organism-specific biosystemSignal transduction is a process in which extracellular signals elicit changes in cell state and activity. Transmembrane receptors sense changes in the cellular environment by binding ligands, such a...
    • Signaling by SCF-KIT, organism-specific biosystem (from REACTOME)
      Signaling by SCF-KIT, organism-specific biosystemStem cell factor (SCF) is a growth factor with membrane bound and soluble forms. It is expressed by fibroblasts and endothelial cells throughout the body, promoting proliferation, migration, survival...
    • Ubiquitin Mediated Degradation of Phosphorylated Cdc25A, organism-specific biosystem (from REACTOME)
      Ubiquitin Mediated Degradation of Phosphorylated Cdc25A, organism-specific biosystemcdc25A protein is degraded by the ubiquitin-proteasome machinery in both terminally differentiating and cycling cells (Bernardi et al. 2000).
    • p53 pathway, organism-specific biosystem (from Pathway Interaction Database)
      p53 pathway, organism-specific biosystem
      p53 pathway
    • p53 signaling pathway, organism-specific biosystem (from KEGG)
      p53 signaling pathway, organism-specific biosystemp53 activation is induced by a number of stress signals, including DNA damage, oxidative stress and activated oncogenes. The p53 protein is employed as a transcriptional activator of p53-regulated ge...
    • p53 signaling pathway, conserved biosystem (from KEGG)
      p53 signaling pathway, conserved biosystemp53 activation is induced by a number of stress signals, including DNA damage, oxidative stress and activated oncogenes. The p53 protein is employed as a transcriptional activator of p53-regulated ge...
    • p53-Independent DNA Damage Response, organism-specific biosystem (from REACTOME)
      p53-Independent DNA Damage Response, organism-specific biosystemIn response to DNA damage due to exposure to ultraviolet light or to ionizing radiation, Cdc25A is phosphorylated by Chk1 or Chk2. The phosphorylation of Cdc25A at ser-123, in response to DNA damage...
    • p53-Independent G1/S DNA damage checkpoint, organism-specific biosystem (from REACTOME)
      p53-Independent G1/S DNA damage checkpoint, organism-specific biosystemThe G1 arrest induced by DNA damage has been ascribed to the transcription factor and tumor suppressor protein p53. To be effective within minutes after DNA damage, induction of the G1 block should ...

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    histone kinase activity (H3-T11 specific) IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein serine/threonine kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    DNA damage checkpoint IDA
    Inferred from Direct Assay
    more info
    PubMed 
    DNA damage checkpoint IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    DNA damage induced protein phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    DNA repair IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    DNA replication TAS
    Traceable Author Statement
    more info
     
    G2/M transition DNA damage checkpoint IMP
    Inferred from Mutant Phenotype
    more info
     
    G2/M transition of mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    cell cycle checkpoint TAS
    Traceable Author Statement
    more info
     
    cellular response to caffeine IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to mechanical stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    cellular response to organic substance IEA
    Inferred from Electronic Annotation
    more info
     
    chromatin-mediated maintenance of transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    histone H3-T11 phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    negative regulation of mitosis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    peptidyl-threonine phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    regulation of S phase IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of double-strand break repair via homologous recombination IDA
    Inferred from Direct Assay
    more info
    PubMed 
    regulation of histone H3-K9 acetylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    regulation of mitotic centrosome separation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    replicative senescence NAS
    Non-traceable Author Statement
    more info
    PubMed 
    response to DNA damage stimulus IMP
    Inferred from Mutant Phenotype
    more info
     
    Component Evidence Code Pubs
    centrosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chromatin ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    colocalizes_with chromosome, telomeric region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    condensed nuclear chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol TAS
    Traceable Author Statement
    more info
     
    nucleoplasm TAS
    Traceable Author Statement
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    replication fork IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    serine/threonine-protein kinase Chk1
    Names
    serine/threonine-protein kinase Chk1
    Chk1-S
    checkpoint kinase-1
    CHK1 checkpoint homolog
    cell cycle checkpoint kinase
    Checkpoint, S. pombe, homolog of, 1
    NP_001107593.1
    NP_001107594.1
    NP_001265.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_030049.1 RefSeqGene

      Range
      5001..56120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001114121.2NP_001107593.1  serine/threonine-protein kinase Chk1 isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 3' UTR compared to variant 1. Variant 1-3 encode the same isoform (1).
      Source sequence(s)
      AK300082, AW149126, BC004202, BX419129, CA441277, CA868104, DA567616
      Consensus CDS
      CCDS8459.1
      UniProtKB/TrEMBL
      B4DT73
      UniProtKB/Swiss-Prot
      O14757
      Related
      ENSP00000412504, OTTHUMP00000231301, ENST00000428830, OTTHUMT00000386706
      Conserved Domains (2) summary
      cd00180
      Location:15262
      Blast Score: 517
      PKc; Catalytic domain of Protein Kinases
      smart00220
      Location:9264
      Blast Score: 705
      S_TKc; Serine/Threonine protein kinases, catalytic domain
    2. NM_001114122.2NP_001107594.1  serine/threonine-protein kinase Chk1 isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the predominant transcript, and encodes isoform 1. Variant 1-3 encode the same isoform.
      Source sequence(s)
      AA224205, AI750792, AK300082, AW149126, BC004202, BG191840, BM455102, BX114781, BX419129, BX506561, CA441277, CA868104, DA567616
      Consensus CDS
      CCDS8459.1
      UniProtKB/TrEMBL
      B4DT73
      UniProtKB/Swiss-Prot
      O14757
      Related
      ENSP00000388648, ENST00000438015
      Conserved Domains (2) summary
      cd00180
      Location:15262
      Blast Score: 517
      PKc; Catalytic domain of Protein Kinases
      smart00220
      Location:9264
      Blast Score: 705
      S_TKc; Serine/Threonine protein kinases, catalytic domain
    3. NM_001244846.1NP_001231775.1  serine/threonine-protein kinase Chk1 isoform 2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) lacks an in-frame coding exon at the 3' end compared to variant 1. This results in a shorter isoform (2) missing an internal protein segment compared to isoform 1.
      Source sequence(s)
      AA224205, AI750792, AK293143, AK300082, AW149126, BC004202, BM455102, BX114781, BX419129, BX506561, CA441277, CA868104, DA567616
      UniProtKB/TrEMBL
      B4DDD0
      UniProtKB/TrEMBL
      B4DT73
      UniProtKB/TrEMBL
      F5H7S4
      UniProtKB/Swiss-Prot
      O14757
      Conserved Domains (2) summary
      cd00180
      Location:15262
      Blast Score: 520
      PKc; Catalytic domain of Protein Kinases
      smart00220
      Location:9264
      Blast Score: 707
      S_TKc; Serine/Threonine protein kinases, catalytic domain
    4. NM_001274.5NP_001265.2  serine/threonine-protein kinase Chk1 isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) contains an alternate 5' non-coding exon compared to variant 1. Variant 1-3 encode the same isoform (1).
      Source sequence(s)
      AA224205, AI750792, BC004202, BC017575, BG191840, BM455102, BP203333, BX114781, BX506561, CA441277
      Consensus CDS
      CCDS8459.1
      UniProtKB/Swiss-Prot
      O14757
      Related
      ENSP00000435371, OTTHUMP00000231306, ENST00000534070, OTTHUMT00000386714
      Conserved Domains (2) summary
      cd00180
      Location:15262
      Blast Score: 517
      PKc; Catalytic domain of Protein Kinases
      smart00220
      Location:9264
      Blast Score: 705
      S_TKc; Serine/Threonine protein kinases, catalytic domain

    RNA

    1. NR_045204.1 RNA Sequence

      Description
      Transcript Variant: This variant (5) lacks an exon in the 5' region compared to variant 1, which reveals an out-of-frame upstream AUG, translation from which results in a protein with a longer and different N-terminus that has no other protein support. However, the transcript is sufficiently abundant to represent as a RefSeq record.
      Source sequence(s)
      AA224205, AI750792, AK300082, AW149126, BC004202, BG191840, BM455102, BX114781, BX419129, BX506561, CA441277, CA868104, DA567616
    2. NR_045205.1 RNA Sequence

      Description
      Transcript Variant: This variant (6) contains an alternate 5' terminal exon compared to variant 1. It is represented as non-coding due to the presence of an upstream ORF (with a strong Kozak signal) that is predicted to interfere with the translation of the longest ORF; translation of the upstream ORF renders this transcript a candidate for nonsense-mediated mRNA decay (NMD).
      Source sequence(s)
      AA224205, AI750792, AK292549, BC004202, BG191840, BG468734, BM455102, BX114781, BX506561, CA441277

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000011.9 Reference GRCh37.p5 Primary Assembly

      Range
      125495036..125546150
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000143.1 Alternate HuRef

      Range
      121436402..121487529
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AB032387.2 BAA84577.1
    genomic AF527555.1 AAM78553.1
    genomic AP001132.4 (19772..49072) None
    genomic AY304548.1 AAQ76038.1
    genomic CH471065.1 EAW67644.1
    mRNA AA224205.1 None
    mRNA AB451222.1 BAG70036.1
    mRNA AB451345.1 BAG70159.1
    mRNA AF016582.1 AAC51736.1
    mRNA AF032874.1 AAB88852.1
    mRNA AI750792.1 None
    mRNA AK292549.1 BAF85238.1
    mRNA AK293143.1 BAG56691.1
    mRNA AK299783.1 BAG61665.1
    mRNA AK300082.1 BAG61885.1
    mRNA AW149126.1 None
    mRNA BC004202.2 AAH04202.1
    mRNA BC017575.1 AAH17575.1
    mRNA BG191840.1 None
    mRNA BG216281.1 None
    mRNA BG218896.1 None
    mRNA BG468734.1 None
    mRNA BM455102.1 None
    mRNA BP203333.1 None
    mRNA BP207812.1 None
    mRNA BX114781.1 None
    mRNA BX419129.2 None
    mRNA BX506561.1 None
    mRNA CA441277.1 None
    mRNA CA868104.1 None
    mRNA DA567616.1 None
    mRNA JF289264.1 AEB71796.1
    other-genetic DQ892907.2 ABM83833.1
    other-genetic DQ896142.2 ABM87141.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    O14757.2 GenPept UniProtKB/Swiss-Prot:O14757
    Q6W8P8 GenPept UniProtKB/TrEMBL:Q6W8P8

      Supplemental Content

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