U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

alx3 ALX homeobox 3 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110966128, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
alx3
Gene description
ALX homeobox 3
See related
Ensembl:ENSAPOG00000018762
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See alx3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 6 NC_067118.1 (38451262..38458644, complement)

Chromosome 6 - NC_067118.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 4 Neighboring gene RNA binding motif protein 15 Neighboring gene solute carrier family 6 member 17 Neighboring gene uncharacterized LOC127534535

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067118.1 Chromosome 6 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
homeobox protein aristaless-like 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067118.1 Reference KAUST_Apoly_ChrSc

    Range
    38451262..38458644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051949897.1 → XP_051805857.1  homeobox protein aristaless-like 3 isoform X1

  2. XM_022215382.2 → XP_022071074.1  homeobox protein aristaless-like 3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1GLB5
    Related
    ENSAPOP00000031496.1
    Conserved Domains (1) summary
    pfam00046
    Location:172 → 224
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.