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pudp pseudouridine 5'-phosphatase [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110965820, updated on 15-Mar-2024

Summary

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Gene symbol
pudp
Gene description
pseudouridine 5'-phosphatase
See related
Ensembl:ENSAPOG00000007000
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 22 NC_067134.1 (12082140..12158363)

Chromosome 22 - NC_067134.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127532128 Neighboring gene patatin-like phospholipase domain containing 4 Neighboring gene steroid sulfatase (microsomal), isozyme S Neighboring gene uncharacterized LOC127532126 Neighboring gene neuroligin 4 X-linked a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067134.1 Chromosome 22 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pseudouridine-5'-phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067134.1 Reference KAUST_Apoly_ChrSc

    Range
    12082140..12158363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022214979.2 → XP_022070671.1  pseudouridine-5'-phosphatase

    UniProtKB/TrEMBL
    A0A3Q1FE28
    Related
    ENSAPOP00000005340.1
    Conserved Domains (1) summary
    cd07529
    Location:9 → 197
    HAD_AtGPP-like; subfamily of beta-phosphoglucomutase-like family, similar to Arabidopsis thaliana Gpp1 and Gpp2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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