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gtf2h4 general transcription factor IIH, polypeptide 4 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110962987, updated on 15-Mar-2024

Summary

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Gene symbol
gtf2h4
Gene description
general transcription factor IIH, polypeptide 4
See related
Ensembl:ENSAPOG00000021081
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 11 NC_067123.1 (15568757..15587706, complement)

Chromosome 11 - NC_067123.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid (GABA) B receptor, 1b Neighboring gene SH3-binding domain protein 5-like, b Neighboring gene uncharacterized LOC127536057 Neighboring gene rho guanine nucleotide exchange factor 2-like Neighboring gene zinc finger MYM-type protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067123.1 Chromosome 11 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067123.1 Reference KAUST_Apoly_ChrSc

    Range
    15568757..15587706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022211146.2 → XP_022066838.1  general transcription factor IIH subunit 4

    UniProtKB/TrEMBL
    A0A3Q1FKZ5, A0A3Q1FQ71
    Related
    ENSAPOP00000017803.1
    Conserved Domains (1) summary
    cl04289
    Location:12 → 460
    Tfb2; Transcription factor Tfb2
Nucleotide Protein
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