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gzf1 GDNF-inducible zinc finger protein 1 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110951556, updated on 15-Mar-2024

Summary

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Gene symbol
gzf1
Gene description
GDNF-inducible zinc finger protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 16 NC_067128.1 (5127756..5137990)

Chromosome 16 - NC_067128.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 29 Neighboring gene uncharacterized LOC110951561 Neighboring gene tribbles pseudokinase 2 Neighboring gene N-ethylmaleimide-sensitive factor attachment protein, beta b Neighboring gene glycerophosphocholine phosphodiesterase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067128.1 Chromosome 16 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF-inducible zinc finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067128.1 Reference KAUST_Apoly_ChrSc

    Range
    5127756..5137990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022194681.2 → XP_022050373.1  GDNF-inducible zinc finger protein 1

    Conserved Domains (6) summary
    COG5048
    Location:374 → 533
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:515 → 535
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:569 → 591
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:21 → 126
    BTB; BTB/POZ domain
    pfam13465
    Location:527 → 552
    zf-H2C2_2; Zinc-finger double domain
    cl00909
    Location:221 → 282
    Ribosomal_L24e_L24; Ribosomal protein L24e/L24 is a ribosomal protein found in eukaryotes (L24) and in archaea (L24e, distinct from archaeal L24). L24e/L24 is located on the surface of the large subunit, adjacent to proteins L14 and L3, and near the translation factor ...
Nucleotide Protein
Heading Accession and Version

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