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tmem50a transmembrane protein 50A [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110950050, updated on 15-Mar-2024

Summary

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Gene symbol
tmem50a
Gene description
transmembrane protein 50A
See related
Ensembl:ENSAPOG00000001179
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 1 NC_067113.1 (13937106..13943676, complement)

Chromosome 1 - NC_067113.1Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor adaptor protein 1b Neighboring gene macoilin 1b Neighboring gene Rh blood group, D antigen Neighboring gene microsomal glutathione S-transferase 3b Neighboring gene arginine/serine-rich protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067113.1 Chromosome 1 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 50A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067113.1 Reference KAUST_Apoly_ChrSc

    Range
    13937106..13943676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022192439.2 → XP_022048131.1  transmembrane protein 50A

    UniProtKB/TrEMBL
    A0A3Q1FUH0
    Related
    ENSAPOP00000020928.1
    Conserved Domains (1) summary
    pfam05255
    Location:8 → 159
    UPF0220; Uncharacterized protein family (UPF0220)
Nucleotide Protein
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