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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ASM221717v1
Genomic
-
NW_019091201.1 Reference ASM221717v1
- Range
-
1656684..1695187
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_022102800.2 → XP_021958492.1 afadin isoform X1
- Related
- XP_021958492.1, XM_022102800.2
- Conserved Domains (5) summary
-
- smart00228
Location:988 → 1072
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00060
Location:370 → 455
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd15471
Location:521 → 840
- Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
- cl00155
Location:25 → 136
- UBQ; Ubiquitin-like proteins
- cl26511
Location:1467 → 1616
- Neuromodulin_N; Gap junction protein N-terminal region
-
XM_022102802.2 → XP_021958494.1 afadin isoform X3
- Related
- XP_021958494.1, XM_022102802.2
- Conserved Domains (5) summary
-
- smart00228
Location:954 → 1038
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00060
Location:370 → 455
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd15471
Location:487 → 806
- Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
- cl00155
Location:25 → 136
- UBQ; Ubiquitin-like proteins
- cl26511
Location:1433 → 1582
- Neuromodulin_N; Gap junction protein N-terminal region
-
XM_022102801.2 → XP_021958493.1 afadin isoform X2
- Related
- XP_021958493.1, XM_022102801.2
- Conserved Domains (5) summary
-
- smart00228
Location:981 → 1065
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00060
Location:363 → 448
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd15471
Location:514 → 833
- Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
- cl00155
Location:25 → 136
- UBQ; Ubiquitin-like proteins
- cl26511
Location:1460 → 1609
- Neuromodulin_N; Gap junction protein N-terminal region
-
XM_022102803.2 → XP_021958495.1 afadin isoform X4
- Related
- XP_021958495.1, XM_022102803.2
- Conserved Domains (4) summary
-
- smart00228
Location:693 → 777
- PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
- cd00060
Location:75 → 160
- FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
- cd15471
Location:226 → 545
- Myo5p-like_CBD_afadin; cargo binding domain of myosin 5-like of afadin
- cl26511
Location:1172 → 1321
- Neuromodulin_N; Gap junction protein N-terminal region