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RAPGEFL1 Rap guanine nucleotide exchange factor like 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110592949, updated on 15-Mar-2024

Summary

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Gene symbol
RAPGEFL1
Gene description
Rap guanine nucleotide exchange factor like 1
See related
EnsemblRapid:ENSNSCG00000001969
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 15 NC_058417.1 (38585440..38598104)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734400.1 (804693..817068, complement)

Chromosome 15 - NC_058417.1Genomic Context describing neighboring genes Neighboring gene CASC3 exon junction complex subunit Neighboring gene U6 spliceosomal RNA Neighboring gene WAS/WASL interacting protein family member 2 Neighboring gene cell division cycle 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rap guanine nucleotide exchange factor-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058417.1 Reference ASM220157v2

    Range
    38585440..38598104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044921636.1 → XP_044777571.1  rap guanine nucleotide exchange factor-like 1 isoform X3

    UniProtKB/TrEMBL
    A0A8M1MUN4
    Conserved Domains (1) summary
    smart00147
    Location:264 → 502
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases

  2. XM_021704148.2 → XP_021559823.1  rap guanine nucleotide exchange factor-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9I7G2
    Conserved Domains (1) summary
    smart00147
    Location:425 → 663
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases

  3. XM_021704149.2 → XP_021559824.1  rap guanine nucleotide exchange factor-like 1 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9IBW4
    Related
    ENSNSCP00000002308.1
    Conserved Domains (1) summary
    smart00147
    Location:420 → 658
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
Nucleotide Protein
Heading Accession and Version

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