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PTPRN protein tyrosine phosphatase receptor type N [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110592000, updated on 15-Mar-2024

Summary

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Gene symbol
PTPRN
Gene description
protein tyrosine phosphatase receptor type N
See related
EnsemblRapid:ENSNSCG00000000606
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
23
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 3 NC_058405.1 (174901625..174919965, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734396.1 (3389699..3408039)

Chromosome 3 - NC_058405.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha chain-like Neighboring gene DnaJ heat shock protein family (Hsp40) member B2 Neighboring gene regulated endocrine specific protein 18 Neighboring gene receptor-type tyrosine-protein phosphatase-like N

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase-like N

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058405.1 Reference ASM220157v2

    Range
    174901625..174919965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044913420.1 → XP_044769355.1  receptor-type tyrosine-protein phosphatase-like N isoform X2

    UniProtKB/TrEMBL
    A0A8M1M8L1
    Conserved Domains (3) summary
    cd14609
    Location:693 → 973
    R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N
    pfam11548
    Location:469 → 557
    Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
    pfam14948
    Location:60 → 136
    RESP18; RESP18 domain

  2. XM_044913419.1 → XP_044769354.1  receptor-type tyrosine-protein phosphatase-like N isoform X1

    UniProtKB/TrEMBL
    A0A8M1MEC3
    Conserved Domains (3) summary
    cd14609
    Location:664 → 944
    R-PTP-N; PTP-like domain of receptor-type tyrosine-protein phosphatase N
    pfam11548
    Location:469 → 528
    Receptor_IA-2; Protein-tyrosine phosphatase receptor IA-2
    pfam14948
    Location:60 → 136
    RESP18; RESP18 domain
Nucleotide Protein
Heading Accession and Version

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