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UPK1A uroplakin 1A [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110590142, updated on 15-Mar-2024

Summary

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Gene symbol
UPK1A
Gene description
uroplakin 1A
See related
EnsemblRapid:ENSNSCG00000019403
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See UPK1A in Genome Data Viewer
Location:
chromosome: 16
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 16 NC_058418.1 (16255437..16263047, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734384.1 (4266256..4273765, complement)

Chromosome 16 - NC_058418.1Genomic Context describing neighboring genes Neighboring gene lysine methyltransferase 2B Neighboring gene zinc finger and BTB domain containing 32 Neighboring gene cytochrome c oxidase subunit 6B1 Neighboring gene ETS variant transcription factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uroplakin-1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058418.1 Reference ASM220157v2

    Range
    16255437..16263047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021700878.1 → XP_021556553.1  uroplakin-1a

    UniProtKB/TrEMBL
    A0A2Y9HY21
    Related
    ENSNSCP00000024400.1, ENSNSCT00000027544.1
    Conserved Domains (1) summary
    cd03156
    Location:111 → 229
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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