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DEPP1 DEPP autophagy regulator 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110589681, updated on 15-Mar-2024

Summary

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Gene symbol
DEPP1
Gene description
DEPP autophagy regulator 1
See related
EnsemblRapid:ENSNSCG00000012321
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Also known as
CUNH10orf10
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 6 NC_058408.1 (115919651..115921109)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734381.1 (28126636..28128094)

Chromosome 6 - NC_058408.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 49-like Neighboring gene zinc finger protein 22 Neighboring gene Ras association domain family member 4 Neighboring gene transmembrane protein 72 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein DEPP1
Names
DEPP1 autophagy regulator
chromosome unknown C10orf10 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058408.1 Reference ASM220157v2

    Range
    115919651..115921109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021700244.1 → XP_021555919.1  protein DEPP1

    UniProtKB/TrEMBL
    A0A2Y9I173
    Related
    ENSNSCP00000015237.1, ENSNSCT00000017221.1
    Conserved Domains (1) summary
    pfam15343
    Location:25 → 208
    DEPP; Decidual protein induced by progesterone family
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases