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CCAR1 cell division cycle and apoptosis regulator 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110589661, updated on 15-Mar-2024

Summary

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Gene symbol
CCAR1
Gene description
cell division cycle and apoptosis regulator 1
See related
EnsemblRapid:ENSNSCG00000001240
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See CCAR1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 6 NC_058408.1 (97789916..97852006)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734381.1 (10031780..10093880)

Chromosome 6 - NC_058408.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 16 Neighboring gene tet methylcytosine dioxygenase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORD98 Neighboring gene U6 spliceosomal RNA Neighboring gene storkhead box 1 Neighboring gene DExD-box helicase 50

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division cycle and apoptosis regulator protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058408.1 Reference ASM220157v2

    Range
    97789916..97852006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021700205.1 → XP_021555880.1  cell division cycle and apoptosis regulator protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9I2R9
    Related
    ENSNSCP00000001307.1, ENSNSCT00000001551.1
    Conserved Domains (5) summary
    smart00513
    Location:637 → 670
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    PRK10927
    Location:187 → 306
    PRK10927; cell division protein FtsN
    TIGR04523
    Location:1036 → 1145
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam14443
    Location:479 → 604
    DBC1
    pfam14444
    Location:148 → 204
    S1-like

  2. XM_044916047.1 → XP_044771982.1  cell division cycle and apoptosis regulator protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8M1MDV0
    Conserved Domains (4) summary
    smart00513
    Location:637 → 670
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    PRK10927
    Location:187 → 306
    PRK10927; cell division protein FtsN
    TIGR04523
    Location:972 → 1081
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    cl09927
    Location:151 → 191
    S1_like; Ribosomal protein S1-like RNA-binding domain. Found in a wide variety of RNA-associated proteins. Originally identified in S1 ribosomal protein. This superfamily also contains the Cold Shock Domain (CSD), which is a homolog of the S1 domain. Both domains ...

  3. XM_044916046.1 → XP_044771981.1  cell division cycle and apoptosis regulator protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9I2R9
    Conserved Domains (5) summary
    smart00513
    Location:637 → 670
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    PRK10927
    Location:187 → 306
    PRK10927; cell division protein FtsN
    TIGR04523
    Location:1036 → 1145
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam14443
    Location:479 → 604
    DBC1
    pfam14444
    Location:148 → 204
    S1-like
Nucleotide Protein
Heading Accession and Version

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