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LSM8 LSM8 homolog, U6 small nuclear RNA associated [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110588929, updated on 15-Mar-2024

Summary

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Gene symbol
LSM8
Gene description
LSM8 homolog, U6 small nuclear RNA associated
See related
EnsemblRapid:ENSNSCG00000020635
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 12 NC_058414.1 (74321712..74328752)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734380.1 (11943783..11950825)

Chromosome 12 - NC_058414.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S12-like Neighboring gene uncharacterized LOC110589019 Neighboring gene ankyrin repeat domain 7 Neighboring gene golgin-45-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U6 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LSM8 homolog, U6 small nuclear RNA associated

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058414.1 Reference ASM220157v2

    Range
    74321712..74328752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021699330.1 → XP_021555005.1  LSM8 homolog, U6 small nuclear RNA associated

    UniProtKB/TrEMBL
    A0A2Y9I096
    Related
    ENSNSCP00000025975.1, ENSNSCT00000029289.1
    Conserved Domains (1) summary
    cd01727
    Location:3 → 92
    LSm8; Like-Sm protein 8
Nucleotide Protein
Heading Accession and Version

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