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ERCC4 ERCC excision repair 4, endonuclease catalytic subunit [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110587899, updated on 15-Mar-2024

Summary

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Gene symbol
ERCC4
Gene description
ERCC excision repair 4, endonuclease catalytic subunit
See related
EnsemblRapid:ENSNSCG00000022496
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See ERCC4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 5 NC_058407.1 (148325784..148353755)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734375.1 (11494040..11522007)

Chromosome 5 - NC_058407.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110588015 Neighboring gene small nucleolar RNA SNORA63 Neighboring gene myocardin related transcription factor B Neighboring gene uncharacterized LOC110588060 Neighboring gene transfer RNA threonine (anticodon CGU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA endodeoxyribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair involved in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in resolution of meiotic recombination intermediates IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleotide-excision repair factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA repair endonuclease XPF

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058407.1 Reference ASM220157v2

    Range
    148325784..148353755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021698121.1 → XP_021553796.1  DNA repair endonuclease XPF

    UniProtKB/TrEMBL
    A0A2Y9HQ83
    Related
    ENSNSCP00000028495.1, ENSNSCT00000032056.1
    Conserved Domains (1) summary
    cl27383
    Location:97 → 907
    ERCC4; ERCC4 domain
Nucleotide Protein
Heading Accession and Version

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