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SH3TC2 SH3 domain and tetratricopeptide repeats 2 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110586683, updated on 15-Mar-2024

Summary

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Gene symbol
SH3TC2
Gene description
SH3 domain and tetratricopeptide repeats 2
See related
EnsemblRapid:ENSNSCG00000001573
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 7 NC_058409.1 (110311967..110362831)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734256.1 (23483172..23534040, complement)

Chromosome 7 - NC_058409.1Genomic Context describing neighboring genes Neighboring gene dnaJ homolog subfamily C member 8-like Neighboring gene U6 spliceosomal RNA Neighboring gene adrenoceptor beta 2 Neighboring gene 5-hydroxytryptamine receptor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ERBB signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH3 domain and tetratricopeptide repeat-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058409.1 Reference ASM220157v2

    Range
    110311967..110362831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021696974.1 → XP_021552649.1  SH3 domain and tetratricopeptide repeat-containing protein 2

    UniProtKB/TrEMBL
    A0A2Y9HS98
    Related
    ENSNSCP00000001762.1, ENSNSCT00000002052.1
    Conserved Domains (3) summary
    sd00006
    Location:1128 → 1155
    TPR; TPR repeat [structural motif]
    cl17036
    Location:272 → 326
    SH3; Src Homology 3 domain superfamily
    cl26002
    Location:774 → 1219
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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