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SLMAP sarcolemma associated protein [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110584960, updated on 15-Mar-2024

Summary

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Gene symbol
SLMAP
Gene description
sarcolemma associated protein
See related
EnsemblRapid:ENSNSCG00000010851
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
29
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 1 NC_058403.1 (189106706..189269434, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734355.1 (6046444..6218886)

Chromosome 1 - NC_058403.1Genomic Context describing neighboring genes Neighboring gene deoxyribonuclease 1L3 Neighboring gene filamin B Neighboring gene small nucleolar RNA SNORA63 Neighboring gene rab GDP dissociation inhibitor beta-like Neighboring gene pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like Neighboring gene uncharacterized LOC110585075 Neighboring gene transfer RNA lysine (anticodon CUU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane depolarization during cardiac muscle cell action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of voltage-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sarcolemmal membrane-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058403.1 Reference ASM220157v2

    Range
    189106706..189269434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044921379.1 → XP_044777314.1  sarcolemmal membrane-associated protein isoform X15

    UniProtKB/TrEMBL
    A0A8M1MZ09
    Conserved Domains (3) summary
    COG0419
    Location:167 → 717
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
    cd22679
    Location:3 → 130
    FHA_SLMAP; forkhead associated (FHA) domain found in sarcolemmal membrane-associated protein (SLMAP) and similar proteins

  2. XM_021695147.2 → XP_021550822.1  sarcolemmal membrane-associated protein isoform X12

    UniProtKB/TrEMBL
    A0A2Y9HGQ6
    Related
    ENSNSCP00000014825.1
    Conserved Domains (3) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:163 → 757
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein

  3. XM_044921364.1 → XP_044777299.1  sarcolemmal membrane-associated protein isoform X10

    UniProtKB/TrEMBL
    A0A8M1MZ06
    Conserved Domains (3) summary
    TIGR02168
    Location:156 → 778
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
    cd22679
    Location:3 → 130
    FHA_SLMAP; forkhead associated (FHA) domain found in sarcolemmal membrane-associated protein (SLMAP) and similar proteins

  4. XM_021695146.2 → XP_021550821.1  sarcolemmal membrane-associated protein isoform X9

    UniProtKB/TrEMBL
    A0A2Y9HGI3
    Conserved Domains (3) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:163 → 774
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein

  5. XM_021695142.2 → XP_021550817.1  sarcolemmal membrane-associated protein isoform X4

    UniProtKB/TrEMBL
    A0A2Y9HGQ1
    Related
    ENSNSCP00000014817.1
    Conserved Domains (2) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cl25732
    Location:163 → 795
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_044921367.1 → XP_044777302.1  sarcolemmal membrane-associated protein isoform X11

    UniProtKB/TrEMBL
    A0A8M1MTW8
    Conserved Domains (3) summary
    TIGR02168
    Location:156 → 774
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
    cd22679
    Location:3 → 130
    FHA_SLMAP; forkhead associated (FHA) domain found in sarcolemmal membrane-associated protein (SLMAP) and similar proteins

  7. XM_044921359.1 → XP_044777294.1  sarcolemmal membrane-associated protein isoform X7

    UniProtKB/TrEMBL
    A0A8M1MZ05
    Conserved Domains (3) summary
    TIGR02168
    Location:156 → 795
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
    cd22679
    Location:3 → 130
    FHA_SLMAP; forkhead associated (FHA) domain found in sarcolemmal membrane-associated protein (SLMAP) and similar proteins

  8. XM_021695144.2 → XP_021550819.1  sarcolemmal membrane-associated protein isoform X6

    UniProtKB/TrEMBL
    A0A2Y9HMM8
    Conserved Domains (3) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:163 → 791
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein

  9. XM_021695141.2 → XP_021550816.1  sarcolemmal membrane-associated protein isoform X2

    UniProtKB/TrEMBL
    A0A2Y9HGH8
    Related
    ENSNSCP00000014802.1
    Conserved Domains (3) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:163 → 812
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein

  10. XM_044921345.1 → XP_044777280.1  sarcolemmal membrane-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A8M1MVN0
    Conserved Domains (2) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:163 → 819
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  11. XM_044921378.1 → XP_044777313.1  sarcolemmal membrane-associated protein isoform X14

    UniProtKB/TrEMBL
    A0A8M1MWX4
    Conserved Domains (2) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:165 → 819
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  12. XM_021695149.1 → XP_021550824.1  sarcolemmal membrane-associated protein isoform X16

    UniProtKB/TrEMBL
    A0A2Y9HMN1
    Conserved Domains (1) summary
    cl25732
    Location:19 → 329
    SMC_N; RecF/RecN/SMC N terminal domain

  13. XM_021695148.2 → XP_021550823.1  sarcolemmal membrane-associated protein isoform X13

    UniProtKB/TrEMBL
    A0A2Y9HGA9
    Related
    ENSNSCP00000014831.1
    Conserved Domains (3) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:163 → 757
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein

  14. XM_021695143.2 → XP_021550818.1  sarcolemmal membrane-associated protein isoform X5

    UniProtKB/TrEMBL
    A0A2Y9HGA4
    Related
    ENSNSCP00000014764.1
    Conserved Domains (3) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:156 → 795
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein

  15. XM_021695145.2 → XP_021550820.1  sarcolemmal membrane-associated protein isoform X8

    UniProtKB/TrEMBL
    A0A2Y9HMV1
    Conserved Domains (3) summary
    cd00060
    Location:14 → 108
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    TIGR02168
    Location:163 → 791
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein

  16. XM_044921350.1 → XP_044777285.1  sarcolemmal membrane-associated protein isoform X3

    UniProtKB/TrEMBL
    A0A8M1MVN4
    Conserved Domains (3) summary
    TIGR02168
    Location:163 → 812
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd21911
    Location:163 → 225
    CC1_SLMAP; first coiled-coil (CC1) domain found in Sarcolemmal membrane-associated protein
    cd22679
    Location:3 → 130
    FHA_SLMAP; forkhead associated (FHA) domain found in sarcolemmal membrane-associated protein (SLMAP) and similar proteins
Nucleotide Protein
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