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GOPC golgi associated PDZ and coiled-coil motif containing [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110583048, updated on 15-Mar-2024

Summary

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Gene symbol
GOPC
Gene description
golgi associated PDZ and coiled-coil motif containing
See related
EnsemblRapid:ENSNSCG00000017439
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 8 NC_058410.1 (44609987..44651985)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734349.1 (44794495..44836490)

Chromosome 8 - NC_058410.1Genomic Context describing neighboring genes Neighboring gene NUS1 dehydrodolichyl diphosphate synthase subunit Neighboring gene nephrocan-like Neighboring gene discoidin, CUB and LCCL domain containing 1 Neighboring gene ROS proto-oncogene 1, receptor tyrosine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi-associated PDZ and coiled-coil motif-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058410.1 Reference ASM220157v2

    Range
    44609987..44651985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044917286.1 → XP_044773221.1  Golgi-associated PDZ and coiled-coil motif-containing protein isoform X2

    UniProtKB/TrEMBL
    A0A8M1MHA2
    Conserved Domains (2) summary
    cd00992
    Location:287 → 369
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    TIGR02168
    Location:35 → 224
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_021693101.1 → XP_021548776.1  Golgi-associated PDZ and coiled-coil motif-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A2Y9HAK2
    Related
    ENSNSCP00000021858.1, ENSNSCT00000024677.1
    Conserved Domains (2) summary
    PRK09039
    Location:46 → 215
    PRK09039; peptidoglycan -binding protein
    cd00992
    Location:279 → 361
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Nucleotide Protein
Heading Accession and Version

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