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DSC3 desmocollin 3 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110576853, updated on 15-Mar-2024

Summary

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Gene symbol
DSC3
Gene description
desmocollin 3
See related
EnsemblRapid:ENSNSCG00000006124
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 14 NC_058416.1 (40840155..40888674)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734302.1 (16950424..16998954, complement)

Chromosome 14 - NC_058416.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27a-like Neighboring gene desmocollin 1 Neighboring gene desmocollin 2 Neighboring gene U6 spliceosomal RNA Neighboring gene coatomer subunit gamma-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gamma-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in desmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: desmocollin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058416.1 Reference ASM220157v2

    Range
    40840155..40888674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021686075.2 → XP_021541750.2  LOW QUALITY PROTEIN: desmocollin-3

    UniProtKB/TrEMBL
    A0A2Y9GV61
    Conserved Domains (3) summary
    cd11304
    Location:246 → 350
    Cadherin_repeat; Cadherin tandem repeat domain
    smart00112
    Location:160 → 240
    CA; Cadherin repeats
    smart01055
    Location:31 → 110
    Cadherin_pro; Cadherin prodomain like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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