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LARP1B La ribonucleoprotein 1B [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110573014, updated on 15-Mar-2024

Summary

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Gene symbol
LARP1B
Gene description
La ribonucleoprotein 1B
See related
EnsemblRapid:ENSNSCG00000016697
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 2 NC_058404.1 (95865648..95995249, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734284.1 (2368996..2497734, complement)

Chromosome 2 - NC_058404.1Genomic Context describing neighboring genes Neighboring gene FAS-associated factor 2-like Neighboring gene progesterone receptor membrane component 2 Neighboring gene predicted GPI-anchored protein 58 Neighboring gene uncharacterized LOC110573017 Neighboring gene abhydrolase domain containing 18 Neighboring gene major facilitator superfamily domain containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA cap binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
la-related protein 1B
Names
La ribonucleoprotein domain family member 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058404.1 Reference ASM220157v2

    Range
    95865648..95995249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044912619.1 → XP_044768554.1  la-related protein 1B

    UniProtKB/TrEMBL
    A0A8M1MBU8
    Conserved Domains (3) summary
    smart00684
    Location:747 → 785
    DM15; Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144.7. Unknown function
    COG5193
    Location:17 → 370
    LHP1; La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis]
    cl02755
    Location:216 → 288
    LAM; LA motif RNA-binding domain
Nucleotide Protein
Heading Accession and Version

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