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RHBDF2 rhomboid 5 homolog 2 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110572589, updated on 15-Mar-2024

Summary

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Gene symbol
RHBDF2
Gene description
rhomboid 5 homolog 2
See related
EnsemblRapid:ENSNSCG00000017664
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
18
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 15 NC_058417.1 (54928608..54938162, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734281.1 (5108543..5132228)

Chromosome 15 - NC_058417.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 O Neighboring gene aralkylamine N-acetyltransferase Neighboring gene cytoglobin Neighboring gene photoreceptor disc component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive rhomboid protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058417.1 Reference ASM220157v2

    Range
    54928608..54938162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021680980.2 → XP_021536655.1  inactive rhomboid protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A2Y9GF57
    Conserved Domains (1) summary
    pfam12595
    Location:112 → 318
    Rhomboid_SP; Rhomboid serine protease

  2. XM_021680979.2 → XP_021536654.1  inactive rhomboid protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9GGP2
    Related
    ENSNSCP00000022266.1
    Conserved Domains (1) summary
    pfam12595
    Location:112 → 318
    Rhomboid_SP; Rhomboid serine protease

  3. XM_044921949.1 → XP_044777884.1  inactive rhomboid protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8M1MZC3
    Conserved Domains (2) summary
    COG0705
    Location:651 → 798
    GlpG; Membrane associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]
    cl28910
    Location:758 → 848
    MFS; Major Facilitator Superfamily

  4. XM_021680981.2 → XP_021536656.1  inactive rhomboid protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A2Y9GC84
    Related
    ENSNSCP00000022236.1
    Conserved Domains (3) summary
    cl00465
    Location:736 → 821
    AI-2E_transport; AI-2E family transporter
    pfam01694
    Location:632 → 775
    Rhomboid; Rhomboid family
    pfam12595
    Location:112 → 318
    Rhomboid_SP; Rhomboid serine protease
Nucleotide Protein
Heading Accession and Version

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