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TRPC4 transient receptor potential cation channel subfamily C member 4 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110570313, updated on 15-Mar-2024

Summary

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Gene symbol
TRPC4
Gene description
transient receptor potential cation channel subfamily C member 4
See related
EnsemblRapid:ENSNSCG00000023488
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 3 NC_058405.1 (64230680..64424615)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734264.1 (16477659..16675860, complement)

Chromosome 3 - NC_058405.1Genomic Context describing neighboring genes Neighboring gene ubiquitin fold modifier 1 Neighboring gene small nucleolar RNA SNORA52 Neighboring gene periostin Neighboring gene hsc70-interacting protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol 1,4,5 trisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables store-operated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in manganese ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cation channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short transient receptor potential channel 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058405.1 Reference ASM220157v2

    Range
    64230680..64424615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021678301.1 → XP_021533976.1  short transient receptor potential channel 4

    UniProtKB/TrEMBL
    A0A2Y9G4M8
    Related
    ENSNSCP00000029792.1, ENSNSCT00000033505.1
    Conserved Domains (2) summary
    TIGR00870
    Location:17 → 749
    trp; transient-receptor-potential calcium channel protein
    sd00045
    Location:122 → 167
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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