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MID2 midline 2 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110570302, updated on 15-Mar-2024

Summary

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Gene symbol
MID2
Gene description
midline 2
See related
EnsemblRapid:ENSNSCG00000001094
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See MID2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) X NC_058419.1 (39738649..39837099, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) X Unlocalized Scaffold NW_018726536.1 (3741080..3842635)

Chromosome X - NC_058419.1Genomic Context describing neighboring genes Neighboring gene V-set and immunoglobulin domain containing 1 Neighboring gene testis expressed 13B Neighboring gene nuclear cap binding protein subunit 2 like Neighboring gene TSC22 domain family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase MID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058419.1 Reference ASM220157v2

    Range
    39738649..39837099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021678304.2 → XP_021533979.1  probable E3 ubiquitin-protein ligase MID2 isoform X2

    UniProtKB/TrEMBL
    A0A2Y9G881
    Conserved Domains (5) summary
    smart00502
    Location:219 → 344
    BBC; B-Box C-terminal domain
    smart00336
    Location:175 → 212
    BBOX; B-Box-type zinc finger
    cd00063
    Location:381 → 481
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd13739
    Location:486 → 655
    SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
    cl17238
    Location:10 → 62
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  2. XM_021678291.1 → XP_021533966.1  probable E3 ubiquitin-protein ligase MID2 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9G4L8
    Conserved Domains (5) summary
    smart00502
    Location:219 → 344
    BBC; B-Box C-terminal domain
    smart00336
    Location:175 → 212
    BBOX; B-Box-type zinc finger
    cd00063
    Location:381 → 511
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd13739
    Location:516 → 685
    SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
    cl17238
    Location:10 → 62
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  3. XM_021678298.1 → XP_021533973.1  probable E3 ubiquitin-protein ligase MID2 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9G4L8
    Related
    ENSNSCP00000001168.1, ENSNSCT00000001401.1
    Conserved Domains (5) summary
    smart00502
    Location:219 → 344
    BBC; B-Box C-terminal domain
    smart00336
    Location:175 → 212
    BBOX; B-Box-type zinc finger
    cd00063
    Location:381 → 511
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd13739
    Location:516 → 685
    SPRY_PRY_TRIM1; PRY/SPRY domain of tripartite motif-binding protein 1 (TRIM1) or MID2
    cl17238
    Location:10 → 62
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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