U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

scyl3 SCY1-like, kinase-like 3 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110524882, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
scyl3
Gene description
SCY1-like, kinase-like 3
See related
Ensembl:ENSOMYG00000014479
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See scyl3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 5 NC_048569.1 (94165238..94174003, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 5 NC_035081.1 (90157734..90166428, complement)

Chromosome 5 - NC_048569.1Genomic Context describing neighboring genes Neighboring gene 14 kDa phosphohistidine phosphatase Neighboring gene fignl1 interacting regulator of recombination and mitosis Neighboring gene P-selectin-like Neighboring gene E-selectin-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein-associating with the carboxyl-terminal domain of ezrin
Names
SCY1 like pseudokinase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048569.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    94165238..94174003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036978891.1 → XP_036834786.1  protein-associating with the carboxyl-terminal domain of ezrin isoform X1

    UniProtKB/TrEMBL
    A0A060Y1P0
    Conserved Domains (3) summary
    sd00044
    Location:345 → 373
    HEAT; HEAT repeat [structural motif]
    NF033804
    Location:516 → 603
    Streccoc_I_II; antigen I/II family LPXTG-anchored adhesin
    cl21453
    Location:33 → 218
    PKc_like; Protein Kinases, catalytic domain

  2. XM_021604841.2 → XP_021460516.1  protein-associating with the carboxyl-terminal domain of ezrin isoform X2

    Conserved Domains (2) summary
    sd00044
    Location:345 → 373
    HEAT; HEAT repeat [structural motif]
    cl21453
    Location:33 → 218
    PKc_like; Protein Kinases, catalytic domain

  3. XM_021604840.2 → XP_021460515.1  protein-associating with the carboxyl-terminal domain of ezrin isoform X1

    UniProtKB/TrEMBL
    A0A060Y1P0
    Related
    ENSOMYP00000030881.1, ENSOMYT00000033669.2
    Conserved Domains (3) summary
    sd00044
    Location:345 → 373
    HEAT; HEAT repeat [structural motif]
    NF033804
    Location:516 → 603
    Streccoc_I_II; antigen I/II family LPXTG-anchored adhesin
    cl21453
    Location:33 → 218
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.