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mapre3b microtubule-associated protein, RP/EB family, member 3b [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110522668, updated on 14-Dec-2023

Summary

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Gene symbol
mapre3b
Gene description
microtubule-associated protein, RP/EB family, member 3b
See related
Ensembl:ENSOMYG00000027064
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
mapre3
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Genomic context

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Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 4 NC_048568.1 (46575173..46607805)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 4 NC_035080.1 (84242541..84274725)

Chromosome 4 - NC_048568.1Genomic Context describing neighboring genes Neighboring gene RAB10, member RAS oncogene family Neighboring gene kinesin-like protein KIF3B Neighboring gene transmembrane protein 214 Neighboring gene AGBL carboxypeptidase 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle midzone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-associated protein RP/EB family member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048568.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    46575173..46607805
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036976459.1 → XP_036832354.1  microtubule-associated protein RP/EB family member 3 isoform X2

    Conserved Domains (1) summary
    COG5217
    Location:16 → 244
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]

  2. XM_036976463.1 → XP_036832358.1  microtubule-associated protein RP/EB family member 3 isoform X2

    Conserved Domains (1) summary
    COG5217
    Location:16 → 244
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]

  3. XM_036976460.1 → XP_036832355.1  microtubule-associated protein RP/EB family member 3 isoform X2

    Conserved Domains (1) summary
    COG5217
    Location:16 → 244
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]

  4. XM_036976462.1 → XP_036832357.1  microtubule-associated protein RP/EB family member 3 isoform X2

    Conserved Domains (1) summary
    COG5217
    Location:16 → 244
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]

  5. XM_036976458.1 → XP_036832353.1  microtubule-associated protein RP/EB family member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C7RW31
    Related
    ENSOMYP00000058567.2, ENSOMYT00000063748.2
    Conserved Domains (1) summary
    COG5217
    Location:44 → 272
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]

  6. XM_036976461.1 → XP_036832356.1  microtubule-associated protein RP/EB family member 3 isoform X2

    Conserved Domains (1) summary
    COG5217
    Location:16 → 244
    BIM1; Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton]
Nucleotide Protein
Heading Accession and Version

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