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mbtps1 membrane-bound transcription factor peptidase, site 1 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110520509, updated on 15-Mar-2024

Summary

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Gene symbol
mbtps1
Gene description
membrane-bound transcription factor peptidase, site 1
See related
Ensembl:ENSOMYG00000021669
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 1 NC_048565.1 (28500843..28526202)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 1 NC_035077.1 (25140484..25165469)

Chromosome 1 - NC_048565.1Genomic Context describing neighboring genes Neighboring gene neuritin 1-like a Neighboring gene protein serine kinase H1 Neighboring gene putative sodium-coupled neutral amino acid transporter 8 Neighboring gene N-terminal EF-hand calcium binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
membrane-bound transcription factor site-1 protease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048565.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    28500843..28526202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021597889.2 → XP_021453564.1  membrane-bound transcription factor site-1 protease

    UniProtKB/TrEMBL
    A0A060VY84, A0A8C7RLM8
    Conserved Domains (1) summary
    cd07479
    Location:230 → 482
    Peptidases_S8_SKI-1_like; Peptidase S8 family domain in SKI-1-like proteins

  2. XM_036975151.1 → XP_036831046.1  membrane-bound transcription factor site-1 protease

    UniProtKB/TrEMBL
    A0A060VY84, A0A8C7RLM8
    Related
    ENSOMYP00000053979.1, ENSOMYT00000058750.2
    Conserved Domains (1) summary
    cd07479
    Location:230 → 482
    Peptidases_S8_SKI-1_like; Peptidase S8 family domain in SKI-1-like proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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