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aldh8a1 aldehyde dehydrogenase 8 family, member A1 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110514696, updated on 15-Mar-2024

Summary

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Gene symbol
aldh8a1
Gene description
aldehyde dehydrogenase 8 family, member A1
See related
Ensembl:ENSOMYG00000025589
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 4 NC_048568.1 (43964691..44002052, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) Unplaced Scaffold NW_018560223.1 (2631..8958)

Chromosome 4 - NC_048568.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 12 Neighboring gene serum/glucocorticoid regulated kinase 1 Neighboring gene uncharacterized LOC118964485 Neighboring gene HBS1-like translational GTPase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinal dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retinoic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-aminomuconic semialdehyde dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048568.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    43964691..44002052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036976416.1 → XP_036832311.1  2-aminomuconic semialdehyde dehydrogenase

    UniProtKB/TrEMBL
    A0A8C7RRA6, A0A8C7VWB8
    Related
    ENSOMYP00000055689.2, ENSOMYT00000060624.2
    Conserved Domains (1) summary
    cd07093
    Location:30 → 488
    ALDH_F8_HMSADH; Human aldehyde dehydrogenase family 8 member A1-like
Nucleotide Protein
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Gene LinkOut

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