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LOC110505040 mediator of RNA polymerase II transcription subunit 19-A [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110505040, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110505040
Gene description
mediator of RNA polymerase II transcription subunit 19-A
See related
Ensembl:ENSOMYG00000022159
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
med19
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Genomic context

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Location:
chromosome: 31
Exon count:
7
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 31 NC_050571.1 (33075921..33084678, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 25 NC_035101.1 (28163883..28168324, complement)

Chromosome 31 - NC_050571.1Genomic Context describing neighboring genes Neighboring gene FACT complex subunit SSRP1 Neighboring gene uncharacterized LOC110504156 Neighboring gene large neutral amino acids transporter small subunit 3 Neighboring gene thioredoxin-related transmembrane protein 2-B Neighboring gene palmitoyltransferase ZDHHC5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 19-A
Names
mediator complex subunit 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_050571.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    33075921..33084678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036969624.1 → XP_036825519.1  mediator of RNA polymerase II transcription subunit 19-A isoform X2

    Conserved Domains (1) summary
    pfam10278
    Location:64 → 197
    Med19; Mediator of RNA pol II transcription subunit 19

  2. XM_021583983.2 → XP_021439658.1  mediator of RNA polymerase II transcription subunit 19-A isoform X1

    UniProtKB/TrEMBL
    A0A060W5Q6, A0A8K9UYV4
    Related
    ENSOMYP00000048683.2, ENSOMYT00000052944.2
    Conserved Domains (1) summary
    pfam10278
    Location:64 → 233
    Med19; Mediator of RNA pol II transcription subunit 19
Nucleotide Protein
Heading Accession and Version

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