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kpna4 karyopherin alpha 4 (importin alpha 3) [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110503793, updated on 15-Mar-2024

Summary

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Gene symbol
kpna4
Gene description
karyopherin alpha 4 (importin alpha 3)
See related
Ensembl:ENSOMYG00000043457
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See kpna4 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
17
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 24 NC_048588.1 (13593942..13607211, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 24 NC_035100.1 (12988179..13001289, complement)

Chromosome 24 - NC_048588.1Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes protein 4-like Neighboring gene tripartite motif-containing protein 59-like Neighboring gene uncharacterized LOC110503797 Neighboring gene protein phosphatase 1L Neighboring gene NMD3 ribosome export adaptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
importin subunit alpha-3
Names
karyopherin subunit alpha 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048588.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    13593942..13607211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021582332.2 → XP_021438007.2  importin subunit alpha-3

    UniProtKB/TrEMBL
    A0A8C7U817, A0A8C7UCS9
    Related
    ENSOMYP00000095594.2, ENSOMYT00000103884.2
    Conserved Domains (2) summary
    COG5064
    Location:11 → 513
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    sd00043
    Location:109 → 142
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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