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slc16a3b solute carrier family 16 member 3b [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110499232, updated on 15-Mar-2024

Summary

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Gene symbol
slc16a3b
Gene description
solute carrier family 16 member 3b
See related
Ensembl:ENSOMYG00000037100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
slc16a3
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 20 NC_048584.1 (24146065..24169492)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 20 NC_035096.1 (21628427..21653229)

Chromosome 20 - NC_048584.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 57 Neighboring gene U7 small nuclear RNA Neighboring gene casein kinase I Neighboring gene uncharacterized LOC118942055 Neighboring gene kinesin-like protein KIF19 Neighboring gene dynein intermediate chain 2, axonemal-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches. Salem M, et al. BMC Genomics, 2010 Oct 13. PMID 20942956, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monocarboxylic acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monocarboxylic acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
monocarboxylate transporter 4
Names
solute carrier family 16 member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048584.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    24146065..24169492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036956059.1 → XP_036811954.1  monocarboxylate transporter 4

    UniProtKB/TrEMBL
    A0A060YAE2, A0A8C7T7V4
    Conserved Domains (1) summary
    cd17430
    Location:21 → 416
    MFS_MCT3_4; Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator Superfamily of transporters

  2. XM_036956060.1 → XP_036811955.1  monocarboxylate transporter 4

    UniProtKB/TrEMBL
    A0A060YAE2, A0A8C7T7V4
    Conserved Domains (1) summary
    cd17430
    Location:21 → 416
    MFS_MCT3_4; Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator Superfamily of transporters

  3. XM_036956058.1 → XP_036811953.1  monocarboxylate transporter 4

    UniProtKB/TrEMBL
    A0A060YAE2, A0A8C7T7V4
    Related
    ENSOMYP00000080108.2, ENSOMYT00000087306.2
    Conserved Domains (1) summary
    cd17430
    Location:21 → 416
    MFS_MCT3_4; Monocarboxylate transporters 9 and 14, and similar proteins of the Major Facilitator Superfamily of transporters
Nucleotide Protein
Heading Accession and Version

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