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TGS1 trimethylguanosine synthase 1 [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110484763, updated on 11-Apr-2024

Summary

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Gene symbol
TGS1
Gene description
trimethylguanosine synthase 1
Locus tag
RLOC_00005543
See related
Ensembl:ENSLSDG00000014374
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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See TGS1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 2 NC_042567.1 (113194445..113216020)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018654951.1 (5333281..5354856, complement)

Chromosome 2 - NC_042567.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 68-like Neighboring gene transmembrane protein 68-like Neighboring gene uncharacterized LOC110484792 Neighboring gene uncharacterized LOC110484762 Neighboring gene LYN proto-oncogene, Src family tyrosine kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA cap trimethylguanosine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 7-methylguanosine RNA capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in 7-methylguanosine cap hypermethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trimethylguanosine synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042567.1 Reference lonStrDom2 Primary Assembly

    Range
    113194445..113216020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021555685.1 → XP_021411360.1  trimethylguanosine synthase

    UniProtKB/TrEMBL
    A0A218VBC2
    Related
    ENSLSDP00000020295.1, ENSLSDT00000022935.1
    Conserved Domains (2) summary
    pfam09445
    Location:737 → 889
    Methyltransf_15; RNA cap guanine-N2 methyltransferase
    cl27845
    Location:632 → 811
    TrmA; tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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