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POLA1 DNA polymerase alpha 1, catalytic subunit [ Lonchura striata domestica (Bengalese finch) ]

Gene ID: 110483268, updated on 15-Mar-2024

Summary

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Gene symbol
POLA1
Gene description
DNA polymerase alpha 1, catalytic subunit
Locus tag
RLOC_00003708
See related
Ensembl:ENSLSDG00000006536
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata domestica (sub-species: domestica)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
37
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 1 NC_042565.1 (13348954..13531222, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657518.1 (2614255..2796523)

Chromosome 1 - NC_042565.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116184831 Neighboring gene aristaless related homeobox Neighboring gene small Cajal body-specific RNA 24 Neighboring gene phosphate cytidylyltransferase 1B, choline Neighboring gene pyruvate dehydrogenase kinase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA replication origin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables purine nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyrimidine nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lagging strand elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leading strand elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic DNA replication initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha DNA polymerase:primase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA polymerase alpha catalytic subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042565.1 Reference lonStrDom2 Primary Assembly

    Range
    13348954..13531222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021552997.1 → XP_021408672.1  DNA polymerase alpha catalytic subunit

    UniProtKB/TrEMBL
    A0A218VCD3
    Related
    ENSLSDP00000008765.1, ENSLSDT00000010164.1
    Conserved Domains (2) summary
    TIGR00592
    Location:52 → 1262
    pol2; DNA polymerase (pol2)
    pfam08996
    Location:1303 → 1493
    zf-DNA_Pol; DNA Polymerase alpha zinc finger
Nucleotide Protein
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